Depending on the size of your input file, and the action required, the process can take few minutes.
You might want to skip the costly verlap definition, reduce the number of file type generated, or the number of chromosomes analysed. First I would recommend to tick the "Collapse Event in summary" box to put together recurrent events.
Because of the various formats it can be difficult to see on the screen (jpeg).But it is possible to generate TIFF, PDF and PNG format as well.Beware that the more format generated the longer it will take to process.If you use Excel format, make sure it is 97-2004 format, rather than the latest.Finally make sure that you have setup enough colors in the configuration file for the number of event type you are using.
It is available in as many format as selected Plot From bottom to top, the events are plotted with specific color per event or per individual, with the name of the sample on the side.If the Highlight option is selected a dark line is showing region with LOH.Use Image Magick to resize, flip, mirror, rotate, distort, shear and transform images, adjust image colors, apply various special effects, or draw text, lines, polygons, ellipses and Bezier curves. Furthermore make sure you filename contains only 1 ".".Because of the diversity of source for this resource it is possible to add a filter for a given pulication and/or Author: The filter works as an AND operator of ":" separated fields.
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